wayne, hard to say, the hive could have been queenless, or queenright and just not as strong as others; superceded and building up. in the process of robbing and chaos/confusion, queens can wind up being killed, whether this is from the 'resident' bees forming a ball around her to protect her, or if she was killed by the robbers.
strong hives always rob weaker hives, especially in nectar dearths, or in the case of placing wet supers back on a hive. one additional comment to this.....when i make up (5 frame nucs), i move them out of my apiary. i have had them robbed out and the queens killed during nectar flows.
also, it's possible that some of your bees joined other hives along the way that accepted them. with the few dozen left, i would just take the frames out away from and in front of your hives and shake them out, and button up your equipment so your comb is not destroyed by pests. the bees will either take up with another colony (if accepted) or perish. there is nothing you can do to salvage the hive or bees, your best move is to protect your equipment.